Apps, R packages and other things I've built. My thesis and papers are on the research page.
Collection
Point-and-click apps for jobs that normally mean writing R. Each one is an R package that installs like any other. All four are on my r-universe.
R package
A Shiny app that turns real marker data into an AlphaSimR founder population without writing R.
R package
A Shiny wizard for making ggplot2 charts from a CSV or Excel file without writing code.
R package
A Shiny app for building genetic linkage maps and mapping QTL without writing code.
R package
A Shiny app for cluster analysis of marker, trait and sequence data.
Install all of them
install.packages(
c("FounderForge", "ggwizard", "linkmapper", "clusnalyst"),
repos = c("https://ebenogoe.r-universe.dev", "https://cloud.r-project.org")
)A Shiny app that turns real marker data into an AlphaSimR founder population without writing R. Load a VCF, HapMap, numeric or PLINK file, check it, filter it and export what newMapPop() needs.
Tools: R · Shiny · golem · AlphaSimR · vcfR · data.table · ggplot2
An Android app for finding a plant again. I built it to walk back to bagged sorghum plants in a crossing block. Now it works for anyone who marks points in a field.
Tools: Kotlin · Jetpack Compose · Room · Paparazzi
An Android app that counts bacterial colonies from plate photos, offline. Two small YOLO models do the counting, in about three quarters of a second a plate on my phone.
Tools: Python · Ultralytics YOLO26 · ONNX Runtime · Kotlin · Jetpack Compose · CVAT
Tools for modding Freedom Fighters, a game from 2003. There's an editor for its textures and models, plus a Blender addon that sends edits back into the game.
Tools: C++17 · Dear ImGui · miniz · HLSL · Python · Blender
A Shiny wizard for making ggplot2 charts from a CSV or Excel file without writing code. You check and clean the data, pick one of eight chart types and style it, then export it with the R script behind it.
Tools: R · Shiny · golem · ggplot2 · plotly · readxl · DT
A Shiny app for building genetic linkage maps and mapping QTL without writing code. It began as the final-year project of two colleagues and me at KNUST. Now it's an R package, with a hosted copy that runs in the browser.
Tools: R · Shiny · golem · onemap · R/qtl · ggiraph
A Shiny app for cluster analysis of marker, trait and sequence data. My colleagues and I built the first version at KNUST in 2022. In 2026 I rewrote it as an R package with a live demo.
Tools: R · Shiny · golem · ape · cluster · msa · ggtree · ggiraph
A book about 600 years old, written in a script nobody can read. Here's what's known about it and why no codebreaker has cracked it, with a note on my own work.
Tools: Python · NumPy · SciPy
